One of the main drawbacks of optical orthogonal frequency division multiplexing(O-OFDM) systems is high peak-to-average power ratio(PAPR), the partial transmission sequence(PTS) technology can effectively reduce the probability of high PAPR, but it has high computational complexity. Duo to the disadvantage of the high computational complexity, a joint-improved PAPR reduction scheme which combines a two-stage PTS with the Clipping technology with lower computational complexity is proposed in this paper. The proposed algorithm partitions the initial input signals after the first d stages of IFFT, and the remaining n-d stages IFFT operations are performed. The simulation results show that the scheme can greatly reduce the computational complexity and improve the PAPR reduction effect and the bit error rate (BER), and has a higher value in practical applications.